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  5. Ceric.30G062000.1

Ceric.30G062000.1 (PUM7, APUM7, Ceric.30G062000)


Aliases : PUM7, APUM7, Ceric.30G062000

Description : not classified & original description: pacid=50608347 polypeptide=Ceric.30G062000.1.p locus=Ceric.30G062000 ID=Ceric.30G062000.1.v2.1 annot-version=v2.1


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.30G062000.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Adi_g008224 APUM12, PUM12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18418 PUM7, APUM7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_171998g0010 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0010970 transport along microtubule IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
BP GO:0030705 cytoskeleton-dependent intracellular transport IEP HCCA
BP GO:0031503 protein-containing complex localization IEP HCCA
BP GO:0042073 intraciliary transport IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0099111 microtubule-based transport IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 709 725
IPR001313 Pumilio_RNA-bd_rpt 636 666
IPR001313 Pumilio_RNA-bd_rpt 525 557
IPR001313 Pumilio_RNA-bd_rpt 785 800
IPR001313 Pumilio_RNA-bd_rpt 744 777
IPR001313 Pumilio_RNA-bd_rpt 560 594
IPR001313 Pumilio_RNA-bd_rpt 601 630
IPR001313 Pumilio_RNA-bd_rpt 671 704
No external refs found!