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Aliases : AGO4, OCP11, Ceric.30G040900
Description : siRNA-integrating factor *(AGO) & original description: pacid=50609563 polypeptide=Ceric.30G040900.1.p locus=Ceric.30G040900 ID=Ceric.30G040900.1.v2.1 annot-version=v2.1
Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.30G040900.1 | |
| Cluster | HCCA: Cluster_155 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00040p00171480 | AGO7, ZIP,... | Protein argonaute 7 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT1G48410 | AGO1 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.03 | OrthoFinder output from all 47 species | |
| AT5G43810 | PNH, AGO10, ZLL | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g016084 | AGO1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g58865 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71412.t1 | AGO9, Aspi01Gene71412 | siRNA-integrating factor *(AGO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g29067 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g06133 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18181 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01030512001 | AGO6 | Chromatin organisation.DNA methylation.canonical... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01037488001 | AGO4, OCP11 | Chromatin organisation.DNA methylation.canonical... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g16870.3 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g58490.1 | AGO1, LOC_Os02g58490 | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g06770.2 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g47870.1 | AGO1, LOC_Os04g47870 | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g39640.1 | PNH, AGO10, ZLL,... | RIS-Complex miRNA recruiting factor (AGO1) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os07g16224.1 | AGO9, LOC_Os07g16224 | siRNA-integrating factor (AGO) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g40869 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03429 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g20400.1 | AGO4, OCP11 | siRNA-integrating factor (AGO) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g07722 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g40206 | AGO5 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g18600 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g39081 | No alias | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g096750.1.1 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g049500.3.1 | AGO6, Solyc07g049500 | siRNA-integrating factor (AGO) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g082830.4.1 | PNH, AGO10, ZLL,... | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g57163 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e012276_P001 | AGO1, Zm00001e012276 | Protein argonaute 12 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e017367_P001 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e025496_P001 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032609_P001 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e033643_P006 | AGO6, Zm00001e033643 | siRNA-integrating factor (AGO) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |