1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.30G033300.1

Ceric.30G033300.1 (Ceric.30G033300)


Aliases : Ceric.30G033300

Description : not classified & original description: pacid=50608686 polypeptide=Ceric.30G033300.1.p locus=Ceric.30G033300 ID=Ceric.30G033300.1.v2.1 annot-version=v2.1


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.30G033300.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Adi_g056214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09210 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007864 No alias not classified & original description: CDS=1-924 0.04 OrthoFinder output from all 47 species
Azfi_s0375.g067256 No alias not classified & original description: CDS=1-1992 0.05 OrthoFinder output from all 47 species
Cba_g09255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16960 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g04773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07402 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g26959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13218 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0295.g027183 No alias not classified & original description: CDS=1-1983 0.04 OrthoFinder output from all 47 species
Spa_g15426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 221 270
IPR002885 Pentatricopeptide_repeat 465 512
IPR002885 Pentatricopeptide_repeat 151 200
IPR002885 Pentatricopeptide_repeat 362 409
IPR002885 Pentatricopeptide_repeat 290 339
IPR002885 Pentatricopeptide_repeat 84 113
IPR002885 Pentatricopeptide_repeat 120 149
IPR002885 Pentatricopeptide_repeat 427 458
No external refs found!