Aliases : NRPC2, Ceric.30G032600
Description : component *(NRPC2) of RNA polymerase III complex & original description: pacid=50608178 polypeptide=Ceric.30G032600.1.p locus=Ceric.30G032600 ID=Ceric.30G032600.1.v2.1 annot-version=v2.1
Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00020p00246930 | NRPC2,... | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00068p00181410 | EMB1989, RPB2,... | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.03 | OrthoFinder output from all 47 species | |
AT5G45140 | NRPC2 | nuclear RNA polymerase C2 | 0.07 | OrthoFinder output from all 47 species | |
Aev_g01571 | EMB1989, RPB2, NRPB2 | component *(NRPB2) of RNA polymerase II complex &... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g39406 | NRPC2 | component *(NRPC2) of RNA polymerase III complex &... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g21244 | EMB1989, RPB2, NRPB2 | component *(NRPB2) of RNA polymerase II complex &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g02614 | DRD2, NRPE2,... | component *(NRPE2) of RNA polymerase V complex &... | 0.04 | OrthoFinder output from all 47 species | |
Als_g03892 | EMB1989, RPB2, NRPB2 | component *(NRPB2) of RNA polymerase II complex &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g07605 | NRPC2 | component *(NRPC2) of RNA polymerase III complex &... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g02927 | EMB1989, RPB2, NRPB2 | component *(NRPB2) of RNA polymerase II complex &... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g11083 | NRPC2 | component *(NRPC2) of RNA polymerase III complex &... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000158.16 | EMB1989, RPB2, NRPB2 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.02 | OrthoFinder output from all 47 species | |
Cre12.g542800 | NRPC2 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g02906 | DRD2, NRPE2,... | component *(NRPE2) of RNA polymerase V complex &... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g09431 | EMB1989, RPB2, NRPB2 | component *(NRPB2) of RNA polymerase II complex &... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g32270 | NRPC2 | component *(NRPC2) of RNA polymerase III complex &... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g01758 | NRPC2 | component *(NRPC2) of RNA polymerase III complex &... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g01687 | EMB1989, RPB2, NRPB2 | component *(NRPB2) of RNA polymerase II complex &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01020543001 | EMB1989, RPB2, NRPB2 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01035963001 | DRD2, NRPE2,... | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01036596001 | NRPC2 | DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g44484.1 | EMB1989, RPB2,... | DNA-directed RNA polymerase II subunit RPB2 OS=Solanum... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g54840.1 | DRD2, NRPE2,... | subunit 2 of Pol IV RNA polymerase. subunit 2 of Pol V... | 0.02 | OrthoFinder output from all 47 species | |
Len_g16317 | EMB1989, RPB2, NRPB2 | component *(NRPB2) of RNA polymerase II complex &... | 0.04 | OrthoFinder output from all 47 species | |
Len_g29891 | NRPC2 | component *(NRPC2) of RNA polymerase III complex &... | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g04274 | NRPC2 | component *(NRPC2) of RNA polymerase III complex &... | 0.05 | OrthoFinder output from all 47 species | |
MA_10429035g0020 | EMB1989, RPB2, NRPB2 | subunit 2 of Pol II RNA polymerase | 0.03 | OrthoFinder output from all 47 species | |
MA_10429035g0030 | EMB1989, RPB2, NRPB2 | DNA-directed RNA polymerase II subunit 2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
MA_342841g0010 | NRPC2 | DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Mp5g21260.1 | DRD2, NRPE2,... | subunit 2 of Pol IV RNA polymerase. subunit 2 of Pol V... | 0.02 | OrthoFinder output from all 47 species | |
Mp6g06170.1 | NRPC2 | subunit 2 of Pol III RNA polymerase | 0.02 | OrthoFinder output from all 47 species | |
Ore_g18280 | NRPC2 | component *(NRPC2) of RNA polymerase III complex &... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g25703 | EMB1989, RPB2, NRPB2 | component *(NRPB2) of RNA polymerase II complex &... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g16160 | No alias | component *(NRPC2) of RNA polymerase III complex &... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g26686 | No alias | component *(NRPB2) of RNA polymerase II complex &... | 0.05 | OrthoFinder output from all 47 species | |
Smo148107 | EMB1989, RPB2, NRPB2 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.05 | OrthoFinder output from all 47 species | |
Smo443461 | NRPC2 | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g078260.3.1 | EMB1989, RPB2,... | subunit 2 of Pol II RNA polymerase | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g078860.2.1 | NRPC2, Solyc10g078860 | subunit 2 of Pol III RNA polymerase | 0.03 | OrthoFinder output from all 47 species | |
Tin_g03543 | DRD2, NRPE2,... | component *(NRPE2) of RNA polymerase V complex &... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g06132 | NRPC2 | component *(NRPC2) of RNA polymerase III complex &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e005007_P001 | EMB1989, RPB2,... | subunit 2 of Pol II RNA polymerase | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e012400_P001 | EMB1989, RPB2,... | subunit 2 of Pol II RNA polymerase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
BP | GO:0006476 | protein deacetylation | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
MF | GO:0010181 | FMN binding | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016575 | histone deacetylation | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
BP | GO:0035601 | protein deacylation | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0098732 | macromolecule deacylation | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
MF | GO:0140612 | DNA damage sensor activity | IEP | HCCA |
MF | GO:0140664 | ATP-dependent DNA damage sensor activity | IEP | HCCA |
No external refs found! |