Solyc07g063230.3.1 (Solyc07g063230.3)


Aliases : Solyc07g063230.3

Description : 34.99 transport.misc Plasma-membrane choline transporter family protein


Gene families : OG_01_0002731 (Gene family) Phylogenetic Tree(s): OG0002731_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc07g063230.3.1
Cluster HCCA cluster: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g58470 Os04g0681400 34.99 transport.misc Plasma-membrane choline transporter... 0.04 Gene family
MA_89558g0010 No alias 34.99 transport.misc Plasma-membrane choline transporter... 0.02 Gene family
Zm00001d001803 GRMZM2G051917 34.99 transport.misc Plasma-membrane choline transporter... 0.04 Gene family
Zm00001d052748 GRMZM2G125768 34.99 transport.misc Plasma-membrane choline transporter... 0.05 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 162 228
IPR002885 Pentatricopeptide_repeat 412 457
IPR007603 Choline_transptr-like 1102 1445
IPR009009 RlpA-like_DPBB 67 151
IPR002885 Pentatricopeptide_repeat 555 580
IPR002885 Pentatricopeptide_repeat 591 617
IPR002885 Pentatricopeptide_repeat 382 407
No external refs found!