1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.30G016300.1

Ceric.30G016300.1 (HUA1, Ceric.30G016300)


Aliases : HUA1, Ceric.30G016300

Description : regulatory protein of RNA homeostasis & original description: pacid=50609069 polypeptide=Ceric.30G016300.1.p locus=Ceric.30G016300 ID=Ceric.30G016300.1.v2.1 annot-version=v2.1


Gene families : OG0002527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002527_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.30G016300.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00115p00126760 HUA1,... RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
Adi_g060210 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ala_g14650 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Als_g62719 HUA1 regulatory protein of RNA homeostasis & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0068.g036245 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0075.g037599 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11355 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dde_g07395 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07725 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01036686001 HUA1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.05 OrthoFinder output from all 47 species
Gb_15324 HUA1 C3H zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Len_g30979 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ore_g33880 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018722 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Solyc12g017410.2.1 HUA1, Solyc12g017410 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 328 352
IPR000571 Znf_CCCH 109 133
IPR000571 Znf_CCCH 161 186
IPR000571 Znf_CCCH 241 266
IPR000571 Znf_CCCH 372 397
No external refs found!