Ceric.30G007000.1 (PRHA, Ceric.30G007000)


Aliases : PRHA, Ceric.30G007000

Description : PHD-type transcription factor & original description: pacid=50608024 polypeptide=Ceric.30G007000.1.p locus=Ceric.30G007000 ID=Ceric.30G007000.1.v2.1 annot-version=v2.1


Gene families : OG0002217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002217_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.30G007000.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Als_g14636 PRHA PHD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g008730.2.1 PRHA, Solyc07g008730 transcription factor (PHD) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 239 294
IPR001356 Homeobox_dom 511 562
No external refs found!