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  5. Ceric.30G003800.1

Ceric.30G003800.1 (RecQl3, ATRECQ3,...)


Aliases : RecQl3, ATRECQ3, Ceric.30G003800

Description : not classified & original description: pacid=50608389 polypeptide=Ceric.30G003800.1.p locus=Ceric.30G003800 ID=Ceric.30G003800.1.v2.1 annot-version=v2.1


Gene families : OG0000844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.30G003800.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00224070 MED34, ATRECQ2,... RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
AMTR_s00118p00027960 ATRECQ4A,... Cell cycle.mitosis and meiosis.meiotic... 0.03 OrthoFinder output from all 47 species
Ala_g09424 RecQl3, ATRECQ3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17774 MED34, ATRECQ2, RECQL2 component *(MED34) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
LOC_Os11g48090.5 MED34, ATRECQ2,... component MED34 of MEDIATOR transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Len_g10275 MED34, ATRECQ2, RECQL2 component *(MED34) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Mp4g00540.1 MED34, ATRECQ2, RECQL2 component MED34 of MEDIATOR transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Mp4g16510.1 RECQI1 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g29303 MED34, ATRECQ2, RECQL2 component *(MED34) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Sam_g50849 No alias component *(MED34) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Solyc08g074600.4.1 MED34, ATRECQ2,... component MED34 of MEDIATOR transcription co-activator complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR032284 RecQ_Zn-bd 219 286
IPR001650 Helicase_C 102 205
No external refs found!