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  5. Ceric.29G080500.1

Ceric.29G080500.1 (Ceric.29G080500)


Aliases : Ceric.29G080500

Description : not classified & original description: pacid=50624681 polypeptide=Ceric.29G080500.1.p locus=Ceric.29G080500 ID=Ceric.29G080500.1.v2.1 annot-version=v2.1


Gene families : OG0002734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002734_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.29G080500.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00173p00060580 evm_27.TU.AmTr_v1... Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT1G77800 No alias PHD finger family protein 0.06 OrthoFinder output from all 47 species
Ala_g06882 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14225 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g29424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69981 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35511.t1 Aspi01Gene35511 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68157.t2 Aspi01Gene68157 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009840 No alias not classified & original description: CDS=194-4429 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.79 ATX3, SDG14 Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Dcu_g03210 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g15953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008944001 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Gb_12353 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_35107 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os02g52960.1 LOC_Os02g52960 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g10690.1 LOC_Os06g10690 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Lfl_g19258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435451g0030 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Msp_g14549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07629 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022590 No alias not classified & original description: CDS=632-4768 0.05 OrthoFinder output from all 47 species
Sam_g14038 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Smo407186 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g22217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13964 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e023803_P003 Zm00001e023803 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e030795_P001 Zm00001e030795 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000120 RNA polymerase I transcription regulator complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006360 transcription by RNA polymerase I IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!