1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.29G058800.1

Ceric.29G058800.1 (Ceric.29G058800)


Aliases : Ceric.29G058800

Description : bHLH-type transcription factor & original description: pacid=50624303 polypeptide=Ceric.29G058800.1.p locus=Ceric.29G058800 ID=Ceric.29G058800.1.v2.1 annot-version=v2.1


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.29G058800.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g018971 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g022340 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024935 ATICE1, ICE1, SCRM bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113443 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09875 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38123 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11432 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007559 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-894 0.05 OrthoFinder output from all 47 species
Cba_g15970 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g50660 AMS bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G042200.1 Ceric.01G042200 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g14460 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22613 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38747 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46087 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51705 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09255 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31340 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13184 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19595 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029311001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Gb_05277 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Lfl_g24609 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_126263g0010 AMS transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_2643g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g07150.1 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Msp_g06243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07921 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g08918 ATBHLH029,... bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g19168 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19857 ATBHLH029,... bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30612 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39417 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43590 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c13_14420V3.1 Pp3c13_14420 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g45924 ATBHLH029,... bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g62545 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015480 No alias bHLH-type transcription factor & original description: CDS=1-1986 0.03 OrthoFinder output from all 47 species
Sam_g16653 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34229 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g42987 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g051550.4.1 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.04 OrthoFinder output from all 47 species
Spa_g04989 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19879 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g27625 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30853 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e040732_P001 ATBHLH029,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 287 334
No external refs found!