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  5. Ehy_g01623

Ehy_g01623 (EMB2763)


Aliases : EMB2763

Description : exoribonuclease *(RRP44a) & original description: none


Gene families : OG0001431 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g01623
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00129280 EMB2763,... RNA processing.RNA decay.exosome complex.associated... 0.03 OrthoFinder output from all 47 species
Ala_g20907 EMB2763 exoribonuclease *(RRP44a) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02337 EMB2763 exoribonuclease *(RRP44a) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21121 EMB2763 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014006 EMB2763 not classified & original description: CDS=194-3646 0.04 OrthoFinder output from all 47 species
Azfi_s0330.g065371 EMB2763 exoribonuclease *(RRP44a) & original description: CDS=168-3026 0.03 OrthoFinder output from all 47 species
Cre14.g613850 EMB2763 Exosome complex exonuclease RRP44 homolog A... 0.01 OrthoFinder output from all 47 species
LOC_Os03g03710.1 EMB2763, LOC_Os03g03710 exoribonuclease (Dis3/RRP44) 0.03 OrthoFinder output from all 47 species
Len_g10105 EMB2763 exoribonuclease *(RRP44a) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02444 No alias exoribonuclease *(SOV) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433522g0020 EMB2763 Exosome complex exonuclease RRP44 homolog A... 0.02 OrthoFinder output from all 47 species
MA_15005g0010 EMB2763 Exosome complex exonuclease RRP44 homolog A... 0.02 OrthoFinder output from all 47 species
MA_207701g0010 EMB2763 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g13575 EMB2763 exoribonuclease *(RRP44a) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16617 EMB2763 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01351 EMB2763 exoribonuclease *(RRP44a) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo156135 EMB2763 RNA processing.RNA decay.exosome complex.associated... 0.04 OrthoFinder output from all 47 species
Smo445658 EMB2763 Exosome complex exonuclease RRP44 homolog A... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004540 ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006189 'de novo' IMP biosynthetic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008837 diaminopimelate epimerase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0047661 amino-acid racemase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR033771 Rrp44_CSD1 218 316
IPR001900 RNase_II/R 470 800
IPR041505 Dis3_CSD2 372 439
IPR002716 PIN_dom 55 176
IPR033770 RRP44_S1 851 929
No external refs found!