1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.29G037600.1

Ceric.29G037600.1 (Ceric.29G037600)


Aliases : Ceric.29G037600

Description : component *(SPT4) of SPT4/5 transcription elongation factor complex & original description: pacid=50624593 polypeptide=Ceric.29G037600.1.p locus=Ceric.29G037600 ID=Ceric.29G037600.1.v2.1 annot-version=v2.1


Gene families : OG0004229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004229_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.29G037600.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g36396 No alias component *(SPT4) of SPT4/5 transcription elongation... 0.03 OrthoFinder output from all 47 species
Ala_g06218 No alias component *(SPT4) of SPT4/5 transcription elongation... 0.04 OrthoFinder output from all 47 species
Len_g27449 SPT42 component *(SPT4) of SPT4/5 transcription elongation... 0.05 OrthoFinder output from all 47 species
Mp5g22120.1 No alias component SPT4 of SPT4/5 transcription elongation factor complex 0.02 OrthoFinder output from all 47 species
Msp_g47377 SPT42 component *(SPT4) of SPT4/5 transcription elongation... 0.05 OrthoFinder output from all 47 species
Pir_g14688 No alias component *(SPT4) of SPT4/5 transcription elongation... 0.04 OrthoFinder output from all 47 species
Pp3c6_2640V3.1 SPT42, Pp3c6_2640 SPT4 homolog 2 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR022800 Spt4/RpoE2_Znf 16 92
No external refs found!