Aliases : LSH4, Ceric.29G008000
Description : plant-specific ALOG-type transcription factor & original description: pacid=50625612 polypeptide=Ceric.29G008000.1.p locus=Ceric.29G008000 ID=Ceric.29G008000.1.v2.1 annot-version=v2.1
Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00067p00052610 | LSH6,... | Protein G1-like2 OS=Oryza sativa subsp. japonica | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00153p00047660 | evm_27.TU.AmTr_v1... | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00155p00022580 | LSH6,... | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.03 | OrthoFinder output from all 47 species | |
AT2G42610 | LSH10 | Protein of unknown function (DUF640) | 0.03 | OrthoFinder output from all 47 species | |
AT3G04510 | LSH2 | Protein of unknown function (DUF640) | 0.04 | OrthoFinder output from all 47 species | |
AT3G23290 | LSH4 | No description available | 0.04 | OrthoFinder output from all 47 species | |
Adi_g024284 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g11211 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01023521001 | No alias | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4... | 0.04 | OrthoFinder output from all 47 species | |
Gb_15426 | LSH4 | Protein G1-like5 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g41460.1 | LSH4, LOC_Os02g41460 | Protein G1-like3 OS=Oryza sativa subsp. indica... | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os02g56610.1 | LSH4, LOC_Os02g56610 | Protein G1-like6 OS=Oryza sativa subsp. indica... | 0.06 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0045.g013197 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g025280.1.1 | LSH4, Solyc09g025280 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.04 | OrthoFinder output from all 47 species | |
Solyc10g008000.1.1 | LSH10, Solyc10g008000 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g07735 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g22798 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g28138 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e004570_P001 | LSH4, Zm00001e004570 | Protein G1-like4 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e012687_P001 | LSH4, Zm00001e012687 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e016177_P002 | LSH4, Zm00001e016177 | Protein G1-like6 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e019403_P001 | LSH6, Zm00001e019403 | Protein G1-like7 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e023639_P001 | LSH4, Zm00001e023639 | Protein G1-like6 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030343_P002 | LSH4, Zm00001e030343 | Protein G1-like2 OS=Oryza sativa subsp. indica... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e037775_P001 | LSH4, Zm00001e037775 | Protein G1-like2 OS=Oryza sativa subsp. indica... | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e041238_P001 | LSH4, Zm00001e041238 | Protein G1-like3 OS=Oryza sativa subsp. indica... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006936 | ALOG_dom | 61 | 180 |
No external refs found! |