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Aliases : Ceric.28G052300
Description : not classified & original description: pacid=50570866 polypeptide=Ceric.28G052300.1.p locus=Ceric.28G052300 ID=Ceric.28G052300.1.v2.1 annot-version=v2.1
Gene families : OG0001556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001556_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.28G052300.1 | |
| Cluster | HCCA: Cluster_121 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g001980 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g058097 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g106961 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g04080 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g51337 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g09381 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g09338 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g15064 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g15857 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g11275 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g03990 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g15023 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Len_g12888 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13644 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g04819 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g14694 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g20265 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g50848 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g15252 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g007340.3.1 | Solyc10g007340 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g04230 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07214 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g54020 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g00945 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g20290 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g28384 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003724 | RNA helicase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |