Solyc07g061780.3.1 (Solyc07g061780.3)


Aliases : Solyc07g061780.3

Description : 29.5.11.5 protein.degradation.ubiquitin.ubiquitin protease Encodes a ubiquitin-specific protease, and its activity has been confirmed in an in vitro assay. ubp15 mutants have defects in cell proliferation, and the associated processes of leaf, root, stem, flower, and silique development. UBP15 can be found in the nucleus and cytoplasm in transient assays. Though UBP15 is expressed in many tissues, UBP15 transcript levels are higher in rosette leaves and inflorescences than in other parts of the plant. ubiquitin-specific protease 15 (UBP15)


Gene families : OG_01_0000134 (Gene family) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc07g061780.3.1
Cluster HCCA cluster: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
AT1G17110 UBP15 ubiquitin-specific protease 15 0.03 Gene family
AT4G17895 UBP20 ubiquitin-specific protease 20 0.02 Gene family
AT4G24560 UBP16 ubiquitin-specific protease 16 0.04 Gene family
GSVIVT01000696001 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.04 Gene family
GSVIVT01033166001 No alias 29.5.11 protein.degradation.ubiquitin ubiquitin-specific... 0.02 Gene family
Smo420048 PACid_15409825 29.5.11 protein.degradation.ubiquitin ubiquitin-specific... 0.02 Gene family
Zm00001d029503 No alias 29.5.11 protein.degradation.ubiquitin Encodes a... 0.02 Gene family
Zm00001d031832 GRMZM2G136443 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA InterProScan
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002893 Znf_MYND 78 115
IPR001394 Peptidase_C19_UCH 451 750
No external refs found!