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  5. Ceric.28G042500.1

Ceric.28G042500.1 (ATRPA32B, RPA32B,...)


Aliases : ATRPA32B, RPA32B, Ceric.28G042500

Description : component *(RPA2) of RPA presynaptic filament assembly factor complex & original description: pacid=50570619 polypeptide=Ceric.28G042500.1.p locus=Ceric.28G042500 ID=Ceric.28G042500.1.v2.1 annot-version=v2.1


Gene families : OG0003036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G042500.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00238780 ATRPA2,... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.03 OrthoFinder output from all 47 species
AT2G24490 ATRPA2,... replicon protein A2 0.04 OrthoFinder output from all 47 species
AT3G02920 ATRPA32B, RPA32B Replication protein A, subunit RPA32 0.03 OrthoFinder output from all 47 species
Adi_g104425 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Ala_g08671 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Aspi01Gene60045.t1 ATRPA32B,... component *(RPA2) of RPA presynaptic filament assembly... 0.05 OrthoFinder output from all 47 species
Azfi_s0074.g037483 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020684.26 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.1 OrthoFinder output from all 47 species
Cre02.g100000 ATRPA32B, RPA32B Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.1 OrthoFinder output from all 47 species
Dcu_g05227 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.04 OrthoFinder output from all 47 species
GSVIVT01035537001 ATRPA2,... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.17 OrthoFinder output from all 47 species
Gb_15876 ATRPA32B, RPA32B component RPA2 of single-stranded-DNA binding RPA... 0.06 OrthoFinder output from all 47 species
LOC_Os02g58220.1 ATRPA2,... component RPA2 of single-stranded-DNA binding RPA... 0.03 OrthoFinder output from all 47 species
LOC_Os06g47830.1 LOC_Os06g47830 component RPA2 of single-stranded-DNA binding RPA... 0.03 OrthoFinder output from all 47 species
Len_g10816 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.14 OrthoFinder output from all 47 species
MA_10607g0010 ATRPA32B, RPA32B component RPA2 of single-stranded-DNA binding RPA... 0.03 OrthoFinder output from all 47 species
Mp5g22240.1 ATRPA32B, RPA32B component RPA2 of single-stranded-DNA binding RPA... 0.14 OrthoFinder output from all 47 species
Msp_g09786 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Nbi_g24314 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Ore_g43078 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Sam_g01656 No alias component *(RPA2) of RPA presynaptic filament assembly... 0.11 OrthoFinder output from all 47 species
Smo440021 ATRPA2,... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.04 OrthoFinder output from all 47 species
Solyc07g018300.3.1 ATRPA2,... component RPA2 of single-stranded-DNA binding RPA... 0.12 OrthoFinder output from all 47 species
Solyc10g081830.3.1 ATRPA32B,... component RPA2 of single-stranded-DNA binding RPA... 0.09 OrthoFinder output from all 47 species
Spa_g07704 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.13 OrthoFinder output from all 47 species
Spa_g07705 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.12 OrthoFinder output from all 47 species
Spa_g07706 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.11 OrthoFinder output from all 47 species
Tin_g05426 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.02 OrthoFinder output from all 47 species
Zm00001e016275_P001 ATRPA2,... component RPA2 of single-stranded-DNA binding RPA... 0.05 OrthoFinder output from all 47 species
Zm00001e030273_P002 Zm00001e030273 component RPA2 of single-stranded-DNA binding RPA... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014892 RPA_C 169 274
IPR004365 NA-bd_OB_tRNA 76 150
No external refs found!