1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.28G033100.1

Ceric.28G033100.1 (Ceric.28G033100)


Aliases : Ceric.28G033100

Description : component *(SWIB) of SWI-B chromatin-remodeling complexes & original description: pacid=50571029 polypeptide=Ceric.28G033100.1.p locus=Ceric.28G033100 ID=Ceric.28G033100.1.v2.1 annot-version=v2.1


Gene families : OG0001482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001482_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G033100.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT4G34290 No alias SWIB/MDM2 domain superfamily protein 0.05 OrthoFinder output from all 47 species
Als_g12934 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.03 OrthoFinder output from all 47 species
Dcu_g00546 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.06 OrthoFinder output from all 47 species
GSVIVT01037881001 No alias No description available 0.03 OrthoFinder output from all 47 species
Lfl_g32769 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.03 OrthoFinder output from all 47 species
Nbi_g01587 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.04 OrthoFinder output from all 47 species
Pir_g02930 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.03 OrthoFinder output from all 47 species
Spa_g12782 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008531 riboflavin kinase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0017007 protein-bilin linkage IEP HCCA
BP GO:0017009 protein-phycocyanobilin linkage IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 68 140
No external refs found!