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  5. Ceric.28G011900.1

Ceric.28G011900.1 (ATRABE1D, ATRAB8C,...)


Aliases : ATRABE1D, ATRAB8C, RAB-E1D, ATRAB-E1D, RAB8C, Ceric.28G011900

Description : E-class RAB GTPase & original description: pacid=50569723 polypeptide=Ceric.28G011900.1.p locus=Ceric.28G011900 ID=Ceric.28G011900.1.v2.1 annot-version=v2.1


Gene families : OG0000945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000945_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G011900.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g117529 ATRABE1C,... E-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117530 ATRABE1C,... E-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30318 ATRABE1D,... E-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03072 ATRABE1D,... E-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene69518.t1 ATRABE1C,... E-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016596001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Lfl_g02703 ATRABE1E, ATRAB8E, RABE1e E-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11145 ATRABE1E, ATRAB8E, RABE1e E-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000647 ATRABE1D,... not classified & original description: CDS=1-615 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011564 ATRABE1C,... not classified & original description: CDS=148-741 0.03 OrthoFinder output from all 47 species
Smo270274 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Zm00001e033170_P001 ATRABE1C,... E-class RAB GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 16 177
No external refs found!