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  5. Ceric.28G006400.1

Ceric.28G006400.1 (Ceric.28G006400)


Aliases : Ceric.28G006400

Description : component *(eL20) of large ribosomal-subunit (LSU) proteome & original description: pacid=50570989 polypeptide=Ceric.28G006400.1.p locus=Ceric.28G006400 ID=Ceric.28G006400.1.v2.1 annot-version=v2.1


Gene families : OG0001533 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001533_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G006400.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00234980 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder output from all 47 species
AT1G29965 No alias Ribosomal protein L18ae/LX family protein 0.06 OrthoFinder output from all 47 species
AT2G34480 No alias Ribosomal protein L18ae/LX family protein 0.19 OrthoFinder output from all 47 species
AT3G14600 No alias Ribosomal protein L18ae/LX family protein 0.13 OrthoFinder output from all 47 species
Adi_g009970 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g041918 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Adi_g075826 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Adi_g112458 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Adi_g125831 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aev_g04441 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ala_g37995 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Als_g19389 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Als_g26369 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Aob_g37546 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g20768 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Aop_g20873 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Aop_g31464 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cba_g69076 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g71011 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.59 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 OrthoFinder output from all 47 species
Cre01.g047750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 OrthoFinder output from all 47 species
Dac_g15791 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Dac_g25344 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g29737 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Dcu_g42842 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
GSVIVT01000485001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 OrthoFinder output from all 47 species
GSVIVT01021430001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 OrthoFinder output from all 47 species
GSVIVT01021433001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 OrthoFinder output from all 47 species
Gb_05341 No alias component RPL18a of LSU proteome component 0.08 OrthoFinder output from all 47 species
LOC_Os01g47660.1 LOC_Os01g47660 component RPL18a of LSU proteome component 0.2 OrthoFinder output from all 47 species
LOC_Os01g54870.1 LOC_Os01g54870 component RPL18a of LSU proteome component 0.14 OrthoFinder output from all 47 species
LOC_Os05g49030.1 LOC_Os05g49030 component RPL18a of LSU proteome component 0.19 OrthoFinder output from all 47 species
Len_g22823 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Len_g39313 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g30273 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
MA_12029g0010 No alias component RPL18a of LSU proteome component 0.14 OrthoFinder output from all 47 species
Mp1g17730.1 No alias component RPL18a of LSU proteome component 0.16 OrthoFinder output from all 47 species
Msp_g09599 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Msp_g23887 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Msp_g33626 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Nbi_g17476 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ore_g05636 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g28896 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pnu_g10363 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g18708 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ppi_g19408 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g25812 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g56033 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Ppi_g64115 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g14890 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Sam_g28083 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g28696 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Sam_g32152 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Sam_g47831 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g48102 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Smo227198 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
Solyc02g070640.3.1 Solyc02g070640 component RPL18a of LSU proteome component 0.13 OrthoFinder output from all 47 species
Solyc02g070650.2.1 Solyc02g070650 component RPL18a of LSU proteome component 0.08 OrthoFinder output from all 47 species
Solyc06g065590.4.1 Solyc06g065590 component RPL18a of LSU proteome component 0.19 OrthoFinder output from all 47 species
Solyc08g016180.3.1 Solyc08g016180 component RPL18a of LSU proteome component 0.23 OrthoFinder output from all 47 species
Spa_g43846 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Tin_g15697 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e020218_P001 Zm00001e020218 component RPL18a of LSU proteome component 0.14 OrthoFinder output from all 47 species
Zm00001e026540_P001 Zm00001e026540 component RPL18a of LSU proteome component 0.18 OrthoFinder output from all 47 species
Zm00001e028015_P002 Zm00001e028015 component RPL18a of LSU proteome component 0.12 OrthoFinder output from all 47 species
Zm00001e032436_P001 Zm00001e032436 component RPL18a of LSU proteome component 0.2 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR023573 Ribosomal_L18a//L18Ae/LX 7 128
No external refs found!