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  5. Ceric.27G070600.1

Ceric.27G070600.1 (Ceric.27G070600)


Aliases : Ceric.27G070600

Description : not classified & original description: pacid=50604908 polypeptide=Ceric.27G070600.1.p locus=Ceric.27G070600 ID=Ceric.27G070600.1.v2.1 annot-version=v2.1


Gene families : OG0005851 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005851_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.27G070600.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g058816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g40014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09145 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g16834 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20558 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03300 MEE40 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g20957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24612 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g22608 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g18950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002605 No alias not classified & original description: CDS=1-2034 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002674 No alias EC_5.1 racemase or epimerase & original description: CDS=1-1806 0.03 OrthoFinder output from all 47 species
Sam_g39889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07746 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g20117 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 282 328
IPR002885 Pentatricopeptide_repeat 456 503
IPR002885 Pentatricopeptide_repeat 635 663
IPR002885 Pentatricopeptide_repeat 599 628
IPR002885 Pentatricopeptide_repeat 390 418
No external refs found!