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  5. Ceric.27G068500.1

Ceric.27G068500.1 (Ceric.27G068500)


Aliases : Ceric.27G068500

Description : SMARCI component *(BRD) of SWI/SNF chromatin remodeling complex & original description: pacid=50605444 polypeptide=Ceric.27G068500.1.p locus=Ceric.27G068500 ID=Ceric.27G068500.1.v2.1 annot-version=v2.1


Gene families : OG0004276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004276_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.27G068500.1

Target Alias Description ECC score Gene Family Method Actions
Als_g10021 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Aob_g11408 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Gb_08461 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g34330.1 LOC_Os12g34330 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g17382 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
MA_76768g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g17646 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ppi_g32784 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Sam_g13974 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Solyc01g087430.3.1 Solyc01g087430 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e018296_P003 Zm00001e018296 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 197 240
IPR019787 Znf_PHD-finger 279 334
No external refs found!