- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : STK, AGL11, Ceric.27G057900
Description : MADS/AGL-type transcription factor & original description: pacid=50605582 polypeptide=Ceric.27G057900.1.p locus=Ceric.27G057900 ID=Ceric.27G057900.1.v2.1 annot-version=v2.1
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00244880 | AGL61, DIA,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00109p00015260 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G24260 | AGL9, SEP3 | K-box region and MADS-box transcription factor family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G42830 | SHP2, AGL5 | K-box region and MADS-box transcription factor family protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g001519 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g045544 | No alias | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g51471 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene17808.t1 | AGL21, Aspi01Gene17808 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene44620.t1 | AGL6, Aspi01Gene44620 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g13784 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g16031 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G037700.1 | AGL65, Ceric.06G037700 | MADS/AGL-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g08553 | GL19, AGL19 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g20590 | AGL30 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g38503 | AGL42 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g48421 | AGL21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g51026 | AGL42 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g10207 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01014093001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01018450001 | AGL6 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019883001 | GL19, AGL19 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025945001 | STK, AGL11 | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01026207001 | AGL32, TT16, ABS | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01035477001 | AGL30 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036549001 | AGL7, AP1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_28587 | AGL8, FUL | transcription factor (MADS/AGL) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g10504.1 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g36924.1 | AGL16, LOC_Os02g36924 | transcription factor (MADS/AGL) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g38780.1 | AGL16, LOC_Os04g38780 | MADS-box transcription factor 27 OS=Oryza sativa subsp.... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g01890.1 | SOC1, AGL20,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g28933 | GL19, AGL19 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g26035 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g38730 | AGL8, FUL | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g38767 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_8748850g0010 | AGL24 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g06990 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g09451 | AGL21 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10184 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04968 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002217 | AGL15 | MADS/AGL-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g18903 | No alias | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g26914 | No alias | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g33302 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g48748 | No alias | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g48749 | No alias | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g080785.1.1 | AGL61, DIA,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g106170.4.1 | AGL21, Solyc01g106170 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g091550.2.1 | AGL21, Solyc02g091550 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g012020.4.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g069430.3.1 | AGL8, FUL, Solyc06g069430 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g056460.3.1 | SOC1, AGL20,... | transcription factor (MADS/AGL) | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g12045 | GL19, AGL19 | MADS/AGL-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g29118 | AGL21 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g31312 | AGL2, SEP1 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g00452 | AGL3, SEP4 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g23921 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014926_P001 | AGL16, Zm00001e014926 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015447_P001 | AGL6, Zm00001e015447 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039610_P001 | AGL8, FUL, Zm00001e039610 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002100 | TF_MADSbox | 10 | 57 |
| No external refs found! |