Solyc07g056020.3.1 (Solyc07g056020.3)


Aliases : Solyc07g056020.3

Description : 29.2.3 protein.synthesis.initiation Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal. fu-gaeri1 (FUG1)


Gene families : OG_01_0001766 (Gene family) Phylogenetic Tree(s): OG0001766_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc07g056020.3.1
Cluster HCCA cluster: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT1G17220 FUG1 Translation initiation factor 2, small GTP-binding protein 0.14 Gene family
Cpa|evm.model.tig00000842.11 No alias 29.2.3 protein.synthesis.initiation Encodes a... 0.03 Gene family
Cre07.g341850 No alias 29.2.3 protein.synthesis.initiation Encodes a... 0.04 Gene family
GSVIVT01020495001 No alias 29.2.3 protein.synthesis.initiation Encodes a... 0.1 Gene family
LOC_Os05g49970 Os05g0575300 29.2.3 protein.synthesis.initiation Encodes a... 0.07 Gene family
MA_4340g0010 No alias 29.2.3 protein.synthesis.initiation Encodes a... 0.05 Gene family
MA_93993g0010 No alias 29.2.3 protein.synthesis.initiation Encodes a... 0.07 Gene family
Smo148692 PACid_15409458 No description available 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan
MF GO:0005525 GTP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR023115 TIF_IF2_dom3 791 882
IPR000795 TF_GTP-bd_dom 488 648
No external refs found!