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  5. Ceric.27G033400.1

Ceric.27G033400.1 (YCF32, PSBY, Ceric.27G033400)


Aliases : YCF32, PSBY, Ceric.27G033400

Description : component *(PsbY) of PS-II complex & original description: pacid=50604832 polypeptide=Ceric.27G033400.1.p locus=Ceric.27G033400 ID=Ceric.27G033400.1.v2.1 annot-version=v2.1


Gene families : OG0003004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.27G033400.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00157390 YCF32, PSBY,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.05 OrthoFinder output from all 47 species
Adi_g001125 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g20925 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Als_g00686 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27429 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63678.t1 YCF32, PSBY,... component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0120.g046761 YCF32, PSBY component *(PsbY) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Cre10.g452100 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.02 OrthoFinder output from all 47 species
Dde_g25972 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11259 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g12730.1 YCF32, PSBY component PsbY of PS-II complex 0.09 OrthoFinder output from all 47 species
Msp_g12997 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27683 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24253 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c8_24120V3.1 YCF32, PSBY, Pp3c8_24120 photosystem II BY 0.01 OrthoFinder output from all 47 species
Ppi_g38878 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018725 YCF32, PSBY component *(PsbY) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021073 YCF32, PSBY component *(PsbY) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022466 YCF32, PSBY component *(PsbY) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0030145 manganese ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR009388 PSII_PsbY 95 127
IPR009388 PSII_PsbY 166 198
IPR009388 PSII_PsbY 302 334
IPR009388 PSII_PsbY 231 263
No external refs found!