Ceric.27G002200.1 (Ceric.27G002200)

Aliases : Ceric.27G002200

Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: pacid=50605542 polypeptide=Ceric.27G002200.1.p locus=Ceric.27G002200 ID=Ceric.27G002200.1.v2.1 annot-version=v2.1

Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.27G002200.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g012249	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g08151	RHC1A	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g10220	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.02	OrthoFinder output from all 47 species
Pir_g12845	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Pir_g50355	RHC1A	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Zm00001e019544_P001	RHC1A, Zm00001e019544	Probable E3 ubiquitin-protein ligase RHC1A...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	Interproscan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009411	response to UV	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	201	243
IPR039525	RNF126-like_zinc-ribbon	7	38

External Links

No external refs found!

Ceric.27G002200.1 (Ceric.27G002200)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation