AMTR_s00140p00089630 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00140.40

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.C-class RAB GTPase


Gene families : OG_01_0002122 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002122_tree ,
OG_02_0001760 (LandPlants) Phylogenetic Tree(s): OG_02_0001760_tree ,
OG_03_0001692 (SeedPlants) Phylogenetic Tree(s): OG_03_0001692_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00140p00089630
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT5G03530 ATRAB ALPHA,... RAB GTPase homolog C2A 0.03 Archaeplastida
Cpa|evm.model.tig00021127.182 No alias Vesicle trafficking.regulation of membrane tethering and... 0.01 Archaeplastida
Cre06.g278139 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
Gb_13791 No alias C-class RAB GTPase 0.03 Archaeplastida
Zm00001e012738_P001 No alias C-class RAB GTPase 0.03 Archaeplastida
AT5G03530 ATRAB ALPHA,... RAB GTPase homolog C2A 0.03 LandPlants
Gb_13791 No alias C-class RAB GTPase 0.03 LandPlants
Zm00001e012738_P001 No alias C-class RAB GTPase 0.03 LandPlants
AT5G03530 ATRAB ALPHA,... RAB GTPase homolog C2A 0.03 SeedPlants
Gb_13791 No alias C-class RAB GTPase 0.03 SeedPlants
Zm00001e012738_P001 No alias C-class RAB GTPase 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0007264 small GTPase mediated signal transduction IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001806 Small_GTPase 15 176
No external refs found!