1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.26G054200.1

Ceric.26G054200.1 (PDF2, Ceric.26G054200)


Aliases : PDF2, Ceric.26G054200

Description : HD-ZIP IV-type transcription factor & original description: pacid=50599886 polypeptide=Ceric.26G054200.1.p locus=Ceric.26G054200 ID=Ceric.26G054200.1.v2.1 annot-version=v2.1


Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.26G054200.1

Target Alias Description ECC score Gene Family Method Actions
AT4G00730 ANL2, AHDP Homeobox-leucine zipper family protein / lipid-binding... 0.14 OrthoFinder output from all 47 species
Aev_g21905 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013073001 HDG5, HB-7 RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
Len_g03368 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Mp7g09710.1 ATML1 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Ore_g18283 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05065 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 302 522
IPR001356 Homeobox_dom 111 166
No external refs found!