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Aliases : Ceric.26G046600
Description : RNA editing factor *(OZ) & original description: pacid=50598899 polypeptide=Ceric.26G046600.1.p locus=Ceric.26G046600 ID=Ceric.26G046600.1.v2.1 annot-version=v2.1
Gene families : OG0001673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001673_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G48570 | No alias | zinc finger (Ran-binding) family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G55040 | No alias | zinc finger (Ran-binding) family protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g054823 | No alias | RNA editing factor *(OZ) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g065042 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g084389 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g108029 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g11397 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g19541 | No alias | RNA editing factor *(OZ) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g15963 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g42021 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0014.g013544 | No alias | RNA editing factor *(OZ) & original description: CDS=1-2409 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0661.g081440 | No alias | RNA editing factor *(OZ) & original description: CDS=90-3326 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g14180 | No alias | RNA editing factor *(OZ) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g11704 | No alias | RNA editing factor *(OZ) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g16799 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02287 | No alias | RNA editing factor *(OZ) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g04668 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18300 | No alias | RNA editing factor *(OZ) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01000088001 | No alias | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008444001 | No alias | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01014166001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Gb_13912 | No alias | RNA editing factor (OZ-type) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38905 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g10630.1 | LOC_Os01g10630 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g50120.1 | LOC_Os03g50120 | RNA editing factor (OZ-type) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g50430.1 | LOC_Os03g50430 | RNA editing factor (OZ-type) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g22024.1 | LOC_Os07g22024 | RNA editing factor (OZ-type) | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g18415 | No alias | RNA editing factor *(OZ) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| MA_10434973g0010 | No alias | RNA editing factor (OZ-type) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10436123g0010 | No alias | RNA editing factor (OZ-type) | 0.05 | OrthoFinder output from all 47 species | |
| MA_10436123g0020 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Mp5g05510.1 | No alias | RNA editing factor (OZ-type) | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g15553 | No alias | RNA editing factor *(OZ) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g00990 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g06378 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07101 | No alias | RNA editing factor *(OZ) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g50896 | No alias | RNA editing factor *(OZ) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Smo426987 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Smo438605 | No alias | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| Solyc01g099230.3.1 | Solyc01g099230 | RNA editing factor (OZ-type) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g11918 | No alias | RNA editing factor *(OZ) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g20697 | No alias | RNA ediTing factor *(OZ) & original description: none | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006284 | base-excision repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001876 | Znf_RanBP2 | 435 | 457 |
| No external refs found! |