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  5. Ceric.26G039600.1

Ceric.26G039600.1 (OTP84, Ceric.26G039600)


Aliases : OTP84, Ceric.26G039600

Description : not classified & original description: pacid=50599489 polypeptide=Ceric.26G039600.1.p locus=Ceric.26G039600 ID=Ceric.26G039600.1.v2.1 annot-version=v2.1


Gene families : OG0011557 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011557_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.26G039600.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Ala_g12970 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16612 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21143 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37518 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08352 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08772 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g44698 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51313 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 110 157
IPR002885 Pentatricopeptide_repeat 311 357
IPR002885 Pentatricopeptide_repeat 411 458
IPR002885 Pentatricopeptide_repeat 588 611
IPR002885 Pentatricopeptide_repeat 515 545
IPR002885 Pentatricopeptide_repeat 487 513
IPR002885 Pentatricopeptide_repeat 212 241
IPR002885 Pentatricopeptide_repeat 183 211
No external refs found!