1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.26G038600.1

Ceric.26G038600.1 (Ceric.26G038600)


Aliases : Ceric.26G038600

Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex & original description: pacid=50599850 polypeptide=Ceric.26G038600.1.p locus=Ceric.26G038600 ID=Ceric.26G038600.1.v2.1 annot-version=v2.1


Gene families : OG0001886 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001886_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.26G038600.1

Target Alias Description ECC score Gene Family Method Actions
AT5G49430 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.03 OrthoFinder output from all 47 species
Adi_g002754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44569.t2 Aspi01Gene44569 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g17526 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g07149 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Len_g10488 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Msp_g16231 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Nbi_g03221 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pnu_g07557 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pnu_g13827 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 394 421
IPR001680 WD40_repeat 580 619
IPR001680 WD40_repeat 277 312
IPR001680 WD40_repeat 317 358
IPR001680 WD40_repeat 234 271
IPR001487 Bromodomain 1785 1821
No external refs found!