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  5. Ceric.26G010200.1

Ceric.26G010200.1 (AtLa1, La1, Ceric.26G010200)


Aliases : AtLa1, La1, Ceric.26G010200

Description : nascent RNA chaperone *(LA) & original description: pacid=50599556 polypeptide=Ceric.26G010200.1.p locus=Ceric.26G010200 ID=Ceric.26G010200.1.v2.1 annot-version=v2.1


Gene families : OG0003172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.26G010200.1

Target Alias Description ECC score Gene Family Method Actions
AT4G32720 AtLa1, La1 La protein 1 0.06 OrthoFinder output from all 47 species
Aev_g11405 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g01557 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11552 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11426 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0008.g011277 AtLa1, La1 nascent RNA chaperone *(LA) & original description: CDS=135-1643 0.03 OrthoFinder output from all 47 species
Cba_g08492 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09267 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02803 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g07377 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035666001 AtLa1, La1 La protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g42010.1 AtLa1, La1,... RNA chaperone (LA). rRNA chaperone (IRP2) 0.05 OrthoFinder output from all 47 species
Len_g05279 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
MA_78251g0010 AtLa1, La1 La protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Mp1g04820.1 AtLa1, La1 RNA chaperone (LA). rRNA chaperone (IRP2) 0.06 OrthoFinder output from all 47 species
Ore_g43153 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00573 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10339 No alias nascent RNA chaperone *(LA) & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g10340 No alias nascent RNA chaperone *(LA) & original description: none 0.06 OrthoFinder output from all 47 species
Solyc08g068310.3.1 AtLa1, La1,... RNA chaperone (LA). rRNA chaperone (IRP2) 0.05 OrthoFinder output from all 47 species
Spa_g09674 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e015074_P001 AtLa1, La1,... RNA chaperone (LA). rRNA chaperone (IRP2) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 116 172
IPR006630 La_HTH 11 80
IPR014886 La_xRRM 313 405
No external refs found!