- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : RBCS1A, Ceric.25G070600
Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer & original description: pacid=50593057 polypeptide=Ceric.25G070600.1.p locus=Ceric.25G070600 ID=Ceric.25G070600.1.v2.1 annot-version=v2.1
Gene families : OG0000735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000735_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0149.g053208 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G016100.1 | RBCS1A, Ceric.12G016100 | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g46369 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g48939 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g05970.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g05980.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g05990.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g06010.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g06020.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g06040.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g09890.1 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g15070.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g43344 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g43345 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c19_1840V3.1 | RBCS1A, Pp3c19_1840 | Ribulose bisphosphate carboxylase (small chain) family protein | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c2_4100V3.1 | RBCS1A, Pp3c2_4100 | ribulose bisphosphate carboxylase small chain 1A | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c4_11770V3.1 | RBCS1A, Pp3c4_11770 | Ribulose bisphosphate carboxylase (small chain) family protein | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01698 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001897 | cytolysis by symbiont of host cells | IEP | HCCA |
| BP | GO:0001907 | killing by symbiont of host cells | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0019836 | hemolysis by symbiont of host erythrocytes | IEP | HCCA |
| BP | GO:0044403 | biological process involved in symbiotic interaction | IEP | HCCA |
| BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | HCCA |
| BP | GO:0051701 | biological process involved in interaction with host | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000894 | RuBisCO_ssu_dom | 58 | 165 |
| No external refs found! |