1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.25G048100.1

Ceric.25G048100.1 (Ceric.25G048100)


Aliases : Ceric.25G048100

Description : not classified & original description: pacid=50594077 polypeptide=Ceric.25G048100.1.p locus=Ceric.25G048100 ID=Ceric.25G048100.1.v2.1 annot-version=v2.1


Gene families : OG0003549 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003549_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.25G048100.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g007051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0167.g054458 No alias not classified & original description: CDS=196-1266 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.82 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre03.g199300 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01033476001 No alias No description available 0.03 OrthoFinder output from all 47 species
Pp3c15_21400V3.1 Pp3c15_21400 Aha1 domain-containing protein 0.02 OrthoFinder output from all 47 species
Sam_g27311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo177496 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEA Interproscan
MF GO:0051087 chaperone binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR015310 AHSA1-like_N 29 165
IPR013538 ASHA1-like_C 228 349
No external refs found!