Solyc07g054290.1.1 (Solyc07g054290.1)

Aliases : Solyc07g054290.1

Description : 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits PSB27

Gene families : OG_01_0006546 (Gene family) Phylogenetic Tree(s): OG0006546_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Solyc07g054290.1.1
Cluster	HCCA cluster: Cluster_149

Target	Alias	Description	ECC score	Gene Family Method
AT1G03600	PSB27	photosystem II family protein	0.12	Gene family
Cre05.g243800	No alias	1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide...	0.04	Gene family
GSVIVT01030552001	No alias	1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide...	0.03	Gene family
MA_388691g0010	No alias	1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide...	0.06	Gene family
Zm00001d029049	GRMZM2G056424	1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide...	0.09	Gene family
Zm00001d047532	GRMZM2G005984	1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide...	0.09	Gene family

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010207	photosystem II assembly	IEA	InterProScan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025585	PSII_Pbs27	67	193

External Links

No external refs found!