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  5. Ceric.25G001800.1

Ceric.25G001800.1 (NFC04, MSI4, NFC4,...)


Aliases : NFC04, MSI4, NFC4, ACG1, FVE, ATMSI4, Ceric.25G001800

Description : flowering time factor *(FVE) & original description: pacid=50594514 polypeptide=Ceric.25G001800.1.p locus=Ceric.25G001800 ID=Ceric.25G001800.1.v2.1 annot-version=v2.1


Gene families : OG0004797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.25G001800.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g078795 NFC04, MSI4,... flowering time factor *(FVE) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g42711 NFC04, MSI4,... flowering time factor *(FVE) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g59205 NFC04, MSI4,... flowering time factor *(FVE) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31637 NFC04, MSI4,... flowering time factor *(FVE) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03800 NFC04, MSI4,... flowering time factor *(FVE) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007834 NFC04, MSI4,... flowering time factor *(FVE) & original description: CDS=245-1618 0.03 OrthoFinder output from all 47 species
Cre06.g268450 NFC04, MSI4,... Chromatin organisation.histone chaperone activities.CAF1... 0.03 OrthoFinder output from all 47 species
Gb_32208 NFC04, MSI4,... component CAF1c/MSI of CAF1 histone chaperone complex 0.05 OrthoFinder output from all 47 species
LOC_Os01g51300.1 NFC04, MSI4,... component CAF1c/MSI of CAF1 histone chaperone complex 0.04 OrthoFinder output from all 47 species
MA_359g0010 NFC04, MSI4,... component CAF1c/MSI of CAF1 histone chaperone complex 0.04 OrthoFinder output from all 47 species
Mp6g10090.1 NFC04, MSI4,... component CAF1c/MSI of CAF1 histone chaperone complex 0.02 OrthoFinder output from all 47 species
Nbi_g39105 NFC04, MSI4,... flowering time factor *(FVE) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10180 NFC04, MSI4,... flowering time factor *(FVE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13270 NFC04, MSI4,... flowering time factor *(FVE) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028156_P001 NFC04, MSI4,... component CAF1c/MSI of CAF1 histone chaperone complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 237 272
IPR001680 WD40_repeat 327 366
IPR001680 WD40_repeat 158 193
IPR001680 WD40_repeat 285 317
IPR022052 Histone-bd_RBBP4_N 11 77
No external refs found!