Ceric.24G080300.1 (Ceric.24G080300)


Aliases : Ceric.24G080300

Description : not classified & original description: pacid=50628596 polypeptide=Ceric.24G080300.1.p locus=Ceric.24G080300 ID=Ceric.24G080300.1.v2.1 annot-version=v2.1


Gene families : OG0001145 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001145_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.24G080300.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g008133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13210 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06270 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g20747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_77759g0010 No alias Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Mp1g29710.1 No alias Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g13022 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g41044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g10979 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc03g116020.3.1 Solyc03g116020 Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g069770.3.1 Solyc06g069770 Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g15579 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000643_P001 Zm00001e000643 Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e038843_P001 Zm00001e038843 Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!