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  5. Ceric.24G062900.1

Ceric.24G062900.1 (RHM1, ROL1, ATRHM1,...)


Aliases : RHM1, ROL1, ATRHM1, Ceric.24G062900

Description : UDP-L-rhamnose synthase *(RHM) & original description: pacid=50628752 polypeptide=Ceric.24G062900.1.p locus=Ceric.24G062900 ID=Ceric.24G062900.1.v2.1 annot-version=v2.1


Gene families : OG0000903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.24G062900.1

Target Alias Description ECC score Gene Family Method Actions
AT1G78570 RHM1, ROL1, ATRHM1 rhamnose biosynthesis 1 0.04 OrthoFinder output from all 47 species
Aev_g13357 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12054 ATRHM2, RHM2,... UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18471.t1 RHM1, ROL1,... UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035479 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: CDS=1-1959 0.06 OrthoFinder output from all 47 species
GSVIVT01014091001 ATRHM3, RHM3 Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
Mp1g04880.1 NRS/ER, UER1 UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 12 317
IPR029903 RmlD-like-bd 378 550
No external refs found!