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  5. Ceric.24G062000.1

Ceric.24G062000.1 (Ceric.24G062000)


Aliases : Ceric.24G062000

Description : regulatory GTPase (NUG1/NSN1) of LSU processome & original description: pacid=50629367 polypeptide=Ceric.24G062000.1.p locus=Ceric.24G062000 ID=Ceric.24G062000.1.v2.1 annot-version=v2.1


Gene families : OG0005439 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005439_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.24G062000.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00118420 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
AT3G07050 No alias GTP-binding family protein 0.05 OrthoFinder output from all 47 species
Aev_g01215 No alias regulatory GTPase (NUG1/NSN1) of LSU processome &... 0.02 OrthoFinder output from all 47 species
Aob_g04373 No alias regulatory GTPase (NUG1/NSN1) of LSU processome &... 0.02 OrthoFinder output from all 47 species
Aop_g13986 No alias regulatory GTPase (NUG1/NSN1) of LSU processome &... 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012682 No alias regulatory GTPase (NUG1/NSN1) of LSU processome &... 0.06 OrthoFinder output from all 47 species
Cba_g02565 No alias regulatory GTPase (NUG1/NSN1) of LSU processome &... 0.03 OrthoFinder output from all 47 species
Cre12.g533050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
GSVIVT01028584001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Gb_31371 No alias NUG1/NSN1 LSU processome regulatory GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os01g27730.1 LOC_Os01g27730 NUG1/NSN1 LSU processome regulatory GTPase 0.07 OrthoFinder output from all 47 species
MA_19380g0010 No alias NUG1/NSN1 LSU processome regulatory GTPase 0.03 OrthoFinder output from all 47 species
Mp8g17210.1 No alias NUG1/NSN1 LSU processome regulatory GTPase 0.08 OrthoFinder output from all 47 species
Ore_g18478 No alias regulatory GTPase (NUG1/NSN1) of LSU processome &... 0.02 OrthoFinder output from all 47 species
Pir_g17640 No alias regulatory GTPase (NUG1/NSN1) of LSU processome &... 0.03 OrthoFinder output from all 47 species
Pp3c12_9000V3.1 Pp3c12_9000 GTP-binding family protein 0.01 OrthoFinder output from all 47 species
Solyc06g083520.3.1 Solyc06g083520 NUG1/NSN1 LSU processome regulatory GTPase 0.05 OrthoFinder output from all 47 species
Solyc09g061430.3.1 Solyc09g061430 NUG1/NSN1 LSU processome regulatory GTPase 0.08 OrthoFinder output from all 47 species
Zm00001e004937_P002 Zm00001e004937 NUG1/NSN1 LSU processome regulatory GTPase 0.09 OrthoFinder output from all 47 species
Zm00001e012467_P001 Zm00001e012467 NUG1/NSN1 LSU processome regulatory GTPase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 265 333
IPR014813 Gnl3_N_dom 15 90
No external refs found!