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  5. Ehy_g01192

Ehy_g01192


Description : plastidial ribosome hibernation-promoting factor *(PSRP1) & original description: none


Gene families : OG0004521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g01192
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00084p00117480 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Aob_g38611 No alias plastidial ribosome hibernation-promoting factor... 0.04 OrthoFinder output from all 47 species
Cba_g08190 No alias plastidial ribosome hibernation-promoting factor... 0.02 OrthoFinder output from all 47 species
Ceric.24G005900.1 Ceric.24G005900 plastidial ribosome hibernation-promoting factor... 0.04 OrthoFinder output from all 47 species
Gb_00693 No alias plastidial ribosome hibernation-promoting factor (PSRP1) 0.04 OrthoFinder output from all 47 species
Lfl_g30596 No alias plastidial ribosome hibernation-promoting factor... 0.03 OrthoFinder output from all 47 species
Msp_g00408 No alias plastidial ribosome hibernation-promoting factor... 0.12 OrthoFinder output from all 47 species
Ore_g30023 No alias plastidial ribosome hibernation-promoting factor... 0.03 OrthoFinder output from all 47 species
Pir_g00350 No alias plastidial ribosome hibernation-promoting factor... 0.03 OrthoFinder output from all 47 species
Ppi_g06824 No alias plastidial ribosome hibernation-promoting factor... 0.04 OrthoFinder output from all 47 species
Spa_g08736 No alias plastidial ribosome hibernation-promoting factor... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0044238 primary metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032528 Ribosom_S30AE_C 233 286
IPR003489 RHF/RaiA 97 193
No external refs found!