Ceric.23G049600.1 (TUB2, Ceric.23G049600)

Aliases : TUB2, Ceric.23G049600

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer & original description: pacid=50610811 polypeptide=Ceric.23G049600.1.p locus=Ceric.23G049600 ID=Ceric.23G049600.1.v2.1 annot-version=v2.1

Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.23G049600.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g068860	TUB7	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0042.g026927	TUB1	not classified & original description: CDS=6-941	0.03	OrthoFinder output from all 47 species
Cba_g38007	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ceric.34G010100.1	TUB8, Ceric.34G010100	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001067.6	TUB2	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Dac_g34924	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
GSVIVT01019758001	TUB6	Tubulin beta-4 chain OS=Eleusine indica	0.03	OrthoFinder output from all 47 species
LOC_Os03g01530.1	TUB8, LOC_Os03g01530	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Msp_g45769	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ore_g16427	TUB6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c6_7400V3.1	TUB2, Pp3c6_7400	tubulin beta 8	0.02	OrthoFinder output from all 47 species
Ppi_g41849	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Sam_g19878	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo183654	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Smo266715	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Spa_g18999	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	261	382
IPR003008	Tubulin_FtsZ_GTPase	3	211

External Links

No external refs found!

Ceric.23G049600.1 (TUB2, Ceric.23G049600)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation