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  5. Ceric.23G038900.1

Ceric.23G038900.1 (CHMP1A, VPS46.2,...)


Aliases : CHMP1A, VPS46.2, Ceric.23G038900

Description : associated protein of ESCRT-III complex *(VPS46/CHMP1) & original description: pacid=50610560 polypeptide=Ceric.23G038900.1.p locus=Ceric.23G038900 ID=Ceric.23G038900.1.v2.1 annot-version=v2.1


Gene families : OG0001221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.23G038900.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00217460 CHMP1A, VPS46.2,... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 OrthoFinder output from all 47 species
Ala_g34247 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.08 OrthoFinder output from all 47 species
Als_g06013 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.1 OrthoFinder output from all 47 species
Aop_g12020 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.14 OrthoFinder output from all 47 species
Aspi01Gene14066.t1 CHMP1A, VPS46.2,... associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.04 OrthoFinder output from all 47 species
Dcu_g02598 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.09 OrthoFinder output from all 47 species
Gb_27834 CHMP1A, VPS46.2 VPS46/CHMP1 associated protein of ESCRT-III complex 0.05 OrthoFinder output from all 47 species
Len_g58527 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.11 OrthoFinder output from all 47 species
Msp_g08498 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.1 OrthoFinder output from all 47 species
Nbi_g10715 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.07 OrthoFinder output from all 47 species
Ppi_g16522 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.04 OrthoFinder output from all 47 species
Sam_g20146 No alias associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.07 OrthoFinder output from all 47 species
Spa_g44088 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.04 OrthoFinder output from all 47 species
Tin_g05400 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 14 177
No external refs found!