Ceric.23G029600.1 (Ceric.23G029600)

Aliases : Ceric.23G029600

Description : STAR-type post-transcriptionally regulatory factor & original description: pacid=50611085 polypeptide=Ceric.23G029600.1.p locus=Ceric.23G029600 ID=Ceric.23G029600.1.v2.1 annot-version=v2.1

Gene families : OG0001245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001245_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Ceric.23G029600.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Dac_g02693 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Zm00001e019459_P001 Zm00001e019459 KH domain-containing protein SPIN1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 151 205
IPR032377 STAR_dimer 43 76
No external refs found!