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  5. Ceric.23G018600.1

Ceric.23G018600.1 (ATBPC4, BPC4, BBR,...)


Aliases : ATBPC4, BPC4, BBR, Ceric.23G018600

Description : BBR/BPC-type transcription factor & original description: pacid=50609885 polypeptide=Ceric.23G018600.1.p locus=Ceric.23G018600 ID=Ceric.23G018600.1.v2.1 annot-version=v2.1


Gene families : OG0000626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.23G018600.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g04010.2 BPC6, BBR/BPC6,... transcription factor (BBR/BPC) 0.03 OrthoFinder output from all 47 species
Len_g05321 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06504 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38324 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g01103 BBR/BPC5, BPC5, ATBPC5 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27190 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24767 No alias BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g008380.4.1 ATBPC1, BPC1,... transcription factor (BBR/BPC) 0.05 OrthoFinder output from all 47 species
Tin_g03134 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003633_P001 ATBPC2, BPC2,... transcription factor (BBR/BPC) 0.03 OrthoFinder output from all 47 species
Zm00001e021942_P001 ATBPC2, BPC2,... transcription factor (BBR/BPC) 0.03 OrthoFinder output from all 47 species
Zm00001e036601_P001 BPC6, BBR/BPC6,... transcription factor (BBR/BPC) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
InterPro domains Description Start Stop
IPR010409 GAGA-bd_tscrpt_act 46 355
No external refs found!