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  5. Ceric.23G003100.1

Ceric.23G003100.1 (Ceric.23G003100)


Aliases : Ceric.23G003100

Description : not classified & original description: pacid=50610792 polypeptide=Ceric.23G003100.1.p locus=Ceric.23G003100 ID=Ceric.23G003100.1.v2.1 annot-version=v2.1


Gene families : OG0004202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.23G003100.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Adi_g012829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_36154 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g17624 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10432734g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_2296g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g15580.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ppi_g03963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo417287 No alias No description available 0.03 OrthoFinder output from all 47 species
Tin_g12796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011767_P002 Zm00001e011767 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 480 517
IPR001680 WD40_repeat 360 410
IPR024761 TFIIIC_delta_N 89 221
No external refs found!