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  5. Ceric.23G002400.1

Ceric.23G002400.1 (FMA, Ceric.23G002400)


Aliases : FMA, Ceric.23G002400

Description : bHLH-type transcription factor & original description: pacid=50610856 polypeptide=Ceric.23G002400.1.p locus=Ceric.23G002400 ID=Ceric.23G002400.1.v2.1 annot-version=v2.1


Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.23G002400.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 FMA,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00008p00198780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
AMTR_s00015p00239460 SPCH,... RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
AMTR_s00025p00081740 MUTE,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G22490 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G46810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G61950 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G46690 bHLH071 beta HLH protein 71 0.06 OrthoFinder output from all 47 species
Ala_g25773 FMA bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10378 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09821 FMA bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18861.t1 FMA, Aspi01Gene18861 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29143.t1 FMA, Aspi01Gene29143 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38670.t1 FMA, Aspi01Gene38670 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60129.t1 FMA, Aspi01Gene60129 bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0007.g010552 FMA bHLH-type transcription factor & original description: CDS=1-1698 0.05 OrthoFinder output from all 47 species
Azfi_s0129.g048899 MUTE bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g00995 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02905 FMA bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g04681 FMA bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17824 FMA bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01027446001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
GSVIVT01028719001 SPCH RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
LOC_Os02g46560.1 LOC_Os02g46560 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os04g50090.1 LOC_Os04g50090 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
LOC_Os09g29360.1 LOC_Os09g29360 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Len_g03257 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_120602g0010 SPCH transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_686524g0010 FMA transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Msp_g31314 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63342 FMA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013314 FMA bHLH-type transcription factor & original description: CDS=1-1482 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0220.g026173 MUTE not classified & original description: CDS=1-492 0.04 OrthoFinder output from all 47 species
Sam_g28288 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g007410.4.1 SPCH, Solyc03g007410 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc05g053660.3.1 FMA, Solyc05g053660 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Spa_g52685 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07072 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g24400 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000161_P002 Zm00001e000161 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e009989_P001 Zm00001e009989 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e014279_P001 SPCH, Zm00001e014279 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e015494_P002 Zm00001e015494 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e023271_P001 Zm00001e023271 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e024824_P001 SPCH, Zm00001e024824 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e026696_P001 MUTE, Zm00001e026696 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e037075_P001 SPCH, Zm00001e037075 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e041403_P001 Zm00001e041403 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 332 382
No external refs found!