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Aliases : RGLG1, Ceric.22G062200
Description : E3 ubiquitin ligase *(RGLG) & original description: pacid=50614318 polypeptide=Ceric.22G062200.1.p locus=Ceric.22G062200 ID=Ceric.22G062200.1.v2.1 annot-version=v2.1
Gene families : OG0000455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000455_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.22G062200.1 | |
| Cluster | HCCA: Cluster_129 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre09.g399550 | RGLG2 | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g31672 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09724 | RGLG1 | E3 ubiquitin ligase *(RGLG) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g01458 | RGLG1 | E3 ubiquitin ligase *(RGLG) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g01231 | RGLG2 | E3 ubiquitin ligase *(RGLG) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_13018 | No alias | RING-HC-class E3 ligase. ligating E3 protein (RGLG) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g40650.1 | RGLG2, LOC_Os06g40650 | RING-HC-class E3 ligase. ligating E3 protein (RGLG) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g19030.1 | RGLG2, LOC_Os12g19030 | RING-HC-class E3 ligase. ligating E3 protein (RGLG) | 0.05 | OrthoFinder output from all 47 species | |
| MA_886734g0010 | No alias | RING-HC-class E3 ligase. ligating E3 protein (RGLG) | 0.04 | OrthoFinder output from all 47 species | |
| Mp6g16390.1 | RGLG2 | RING-HC-class E3 ligase. ligating E3 protein (RGLG) | 0.02 | OrthoFinder output from all 47 species | |
| Mp6g16430.1 | RGLG2 | RING-HC-class E3 ligase. ligating E3 protein (RGLG) | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07481 | No alias | E3 ubiquitin ligase *(RGLG) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007285 | RGLG2 | E3 ubiquitin ligase *(RGLG) & original description: CDS=1-966 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0202.g025630 | RGLG1 | E3 ubiquitin ligase *(RGLG) & original description: CDS=723-1898 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g09885 | No alias | E3 ubiquitin ligase *(RGLG) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19140 | No alias | E3 ubiquitin ligase *(RGLG) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05172 | RGLG2 | E3 ubiquitin ligase *(RGLG) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e017810_P001 | RGLG2, Zm00001e017810 | RING-HC-class E3 ligase. ligating E3 protein (RGLG) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028521_P002 | RGLG2, Zm00001e028521 | RING-HC-class E3 ligase. ligating E3 protein (RGLG) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e037447_P002 | RGLG2, Zm00001e037447 | RING-HC-class E3 ligase. ligating E3 protein (RGLG) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004664 | prephenate dehydratase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006558 | L-phenylalanine metabolic process | IEP | HCCA |
| BP | GO:0006914 | autophagy | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
| BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | HCCA |
| BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| MF | GO:0019786 | Atg8-specific peptidase activity | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | HCCA |
| BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010734 | Copine_C | 76 | 290 |
| No external refs found! |