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  5. Ceric.22G014000.1

Ceric.22G014000.1 (Ceric.22G014000)


Aliases : Ceric.22G014000

Description : not classified & original description: pacid=50615208 polypeptide=Ceric.22G014000.1.p locus=Ceric.22G014000 ID=Ceric.22G014000.1.v2.1 annot-version=v2.1


Gene families : OG0001250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001250_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.22G014000.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00259780 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
AMTR_s00022p00130870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g14580,... 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00214000 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g09060... 0.06 OrthoFinder output from all 47 species
AMTR_s00066p00107660 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00041370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g48810... 0.04 OrthoFinder output from all 47 species
AMTR_s00111p00140430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g01400,... 0.05 OrthoFinder output from all 47 species
AMTR_s00221p00020810 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16420,... 0.02 OrthoFinder output from all 47 species
AT1G07740 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G13150 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g060042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0177.g056145 No alias not classified & original description: CDS=1-1962 0.07 OrthoFinder output from all 47 species
Cba_g01242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017298001 No alias Pentatricopeptide repeat-containing protein At1g80150,... 0.03 OrthoFinder output from all 47 species
GSVIVT01027435001 No alias Pentatricopeptide repeat-containing protein At1g05600... 0.03 OrthoFinder output from all 47 species
Gb_23263 No alias Pentatricopeptide repeat-containing protein At5g46100... 0.04 OrthoFinder output from all 47 species
LOC_Os01g48140.1 LOC_Os01g48140 Pentatricopeptide repeat-containing protein At5g46100... 0.03 OrthoFinder output from all 47 species
LOC_Os01g58080.1 PPR336, LOC_Os01g58080 PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.02 OrthoFinder output from all 47 species
LOC_Os02g42210.1 LOC_Os02g42210 Pentatricopeptide repeat-containing protein At4g36680,... 0.06 OrthoFinder output from all 47 species
LOC_Os05g04160.1 LOC_Os05g04160 Pentatricopeptide repeat-containing protein At3g48810... 0.03 OrthoFinder output from all 47 species
LOC_Os08g39050.1 LOC_Os08g39050 Pentatricopeptide repeat-containing protein At1g80150,... 0.03 OrthoFinder output from all 47 species
MA_125741g0010 No alias Pentatricopeptide repeat-containing protein At5g16420,... 0.03 OrthoFinder output from all 47 species
MA_137206g0010 No alias PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.02 OrthoFinder output from all 47 species
MA_525159g0010 No alias Pentatricopeptide repeat-containing protein At1g07740,... 0.03 OrthoFinder output from all 47 species
MA_71816g0020 No alias Pentatricopeptide repeat-containing protein At3g14580,... 0.03 OrthoFinder output from all 47 species
MA_742945g0010 No alias Pentatricopeptide repeat-containing protein At5g16420,... 0.03 OrthoFinder output from all 47 species
MA_80720g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012950 No alias not classified & original description: CDS=1-1968 0.05 OrthoFinder output from all 47 species
Solyc02g077650.2.1 Solyc02g077650 Pentatricopeptide repeat-containing protein At5g46100... 0.05 OrthoFinder output from all 47 species
Solyc02g079830.1.1 Solyc02g079830 Pentatricopeptide repeat-containing protein At3g13160,... 0.03 OrthoFinder output from all 47 species
Solyc09g014210.3.1 Solyc09g014210 Pentatricopeptide repeat-containing protein At3g09060... 0.04 OrthoFinder output from all 47 species
Solyc12g014330.1.1 Solyc12g014330 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc12g035170.3.1 Solyc12g035170 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e015190_P001 Zm00001e015190 Pentatricopeptide repeat-containing protein At2g18520,... 0.04 OrthoFinder output from all 47 species
Zm00001e019591_P001 PPR336, Zm00001e019591 PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.03 OrthoFinder output from all 47 species
Zm00001e028732_P001 Zm00001e028732 Pentatricopeptide repeat-containing protein At3g09060... 0.03 OrthoFinder output from all 47 species
Zm00001e028938_P001 Zm00001e028938 Pentatricopeptide repeat-containing protein At1g55890,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 169 216
IPR002885 Pentatricopeptide_repeat 305 353
IPR002885 Pentatricopeptide_repeat 481 529
IPR002885 Pentatricopeptide_repeat 410 457
IPR002885 Pentatricopeptide_repeat 381 408
IPR002885 Pentatricopeptide_repeat 554 582
IPR002885 Pentatricopeptide_repeat 269 298
No external refs found!