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  5. Ceric.22G009200.1

Ceric.22G009200.1 (Ceric.22G009200)


Aliases : Ceric.22G009200

Description : DNA bending architectural protein *(HMG-B) & original description: pacid=50614036 polypeptide=Ceric.22G009200.1.p locus=Ceric.22G009200 ID=Ceric.22G009200.1.v2.1 annot-version=v2.1


Gene families : OG0000754 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.22G009200.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g066995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087201 No alias DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Adi_g103222 No alias DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Adi_g109806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07307 No alias DNA bending architectural protein *(HMG-B) & original... 0.04 OrthoFinder output from all 47 species
Als_g22500 No alias DNA bending architectural protein *(HMG-B) & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0076.g037858 No alias DNA bending architectural protein *(HMG-B) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g07107 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g31919 No alias DNA bending architectural protein *(HMG-B) & original... 0.07 OrthoFinder output from all 47 species
Dde_g22960 No alias DNA bending architectural protein *(HMG-B) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g20806 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g26907 No alias DNA bending architectural protein *(HMG-B) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g02237 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
MA_5840g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g01122 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Ore_g29651 No alias DNA bending architectural protein *(HMG-B) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012027 No alias DNA bending architectural protein *(HMG-B) & original... 0.04 OrthoFinder output from all 47 species
Sam_g09033 No alias DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Solyc09g091960.3.1 Solyc09g091960 High mobility group B protein 15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g09265 No alias DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Tin_g02883 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR001606 ARID_dom 189 272
IPR009071 HMG_box_dom 421 485
No external refs found!