Ceric.22G004000.1 (Ceric.22G004000)

Aliases : Ceric.22G004000

Description : primase component *(POLA3) of DNA polymerase alpha complex & original description: pacid=50615362 polypeptide=Ceric.22G004000.1.p locus=Ceric.22G004000 ID=Ceric.22G004000.1.v2.1 annot-version=v2.1

Gene families : OG0007515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007515_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.22G004000.1

Target	Alias	Description	ECC score	Gene Family Method
AT1G67320	No alias	DNA primase, large subunit family	0.07	OrthoFinder output from all 47 species
Als_g00918	No alias	primase component *(POLA3) of DNA polymerase alpha...	0.04	OrthoFinder output from all 47 species
Aop_g06919	No alias	primase component *(POLA3) of DNA polymerase alpha...	0.11	OrthoFinder output from all 47 species
Aspi01Gene00133.t1	Aspi01Gene00133	primase component *(POLA3) of DNA polymerase alpha...	0.03	OrthoFinder output from all 47 species
Azfi_s0242.g059810	No alias	primase component *(POLA3) of DNA polymerase alpha...	0.07	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020848.68	No alias	Cell cycle.interphase.DNA replication.elongation.DNA...	0.08	OrthoFinder output from all 47 species
Cre06.g293000	No alias	Cell cycle.interphase.DNA replication.elongation.DNA...	0.06	OrthoFinder output from all 47 species
Dac_g13828	No alias	primase component *(POLA3) of DNA polymerase alpha...	0.07	OrthoFinder output from all 47 species
Dcu_g14762	No alias	primase component *(POLA3) of DNA polymerase alpha...	0.12	OrthoFinder output from all 47 species
GSVIVT01029087001	No alias	Cell cycle.interphase.DNA replication.elongation.DNA...	0.08	OrthoFinder output from all 47 species
Gb_25310	No alias	Probable DNA primase large subunit OS=Arabidopsis...	0.11	OrthoFinder output from all 47 species
Gb_25312	No alias	primase component POLA3 of DNA polymerase alpha complex	0.11	OrthoFinder output from all 47 species
LOC_Os07g22400.2	LOC_Os07g22400	primase component POLA3 of DNA polymerase alpha complex	0.07	OrthoFinder output from all 47 species
MA_99205g0020	No alias	primase component POLA3 of DNA polymerase alpha complex	0.07	OrthoFinder output from all 47 species
Mp7g17480.1	No alias	primase component POLA3 of DNA polymerase alpha complex	0.1	OrthoFinder output from all 47 species
Msp_g07837	No alias	primase component *(POLA3) of DNA polymerase alpha...	0.07	OrthoFinder output from all 47 species
Ppi_g63485	No alias	primase component *(POLA3) of DNA polymerase alpha...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015210	No alias	primase component *(POLA3) of DNA polymerase alpha...	0.04	OrthoFinder output from all 47 species
Solyc04g045530.4.1	Solyc04g045530	primase component POLA3 of DNA polymerase alpha complex	0.08	OrthoFinder output from all 47 species
Spa_g08160	No alias	primase component *(POLA3) of DNA polymerase alpha...	0.07	OrthoFinder output from all 47 species
Tin_g10410	No alias	primase component *(POLA3) of DNA polymerase alpha...	0.1	OrthoFinder output from all 47 species
Zm00001e039405_P003	Zm00001e039405	primase component POLA3 of DNA polymerase alpha complex	0.03	OrthoFinder output from all 47 species
Zm00001e040751_P005	Zm00001e040751	primase component POLA3 of DNA polymerase alpha complex	0.11	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006269	DNA replication, synthesis of RNA primer	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	HCCA
MF	GO:0003896	DNA primase activity	IEP	HCCA
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0004146	dihydrofolate reductase activity	IEP	HCCA
CC	GO:0005680	anaphase-promoting complex	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	HCCA
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	HCCA
BP	GO:0010564	regulation of cell cycle process	IEP	HCCA
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	HCCA
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
BP	GO:0033045	regulation of sister chromatid segregation	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	HCCA
BP	GO:0046654	tetrahydrofolate biosynthetic process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0051983	regulation of chromosome segregation	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901987	regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	HCCA
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007238	DNA_primase_lsu_euk/arc	172	437

External Links

No external refs found!

Ceric.22G004000.1 (Ceric.22G004000)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation