Aliases : PMS1, Ceric.21G086600
Description : component *(PMS1) of MLH1-PMS1 heterodimer & original description: pacid=50604362 polypeptide=Ceric.21G086600.1.p locus=Ceric.21G086600 ID=Ceric.21G086600.1.v2.1 annot-version=v2.1
Gene families : OG0005197 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005197_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G02460 | PMS1 | DNA mismatch repair protein, putative | 0.03 | OrthoFinder output from all 47 species | |
Adi_g058158 | PMS1 | component *(PMS1) of MLH1-PMS1 heterodimer & original... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000057.93 | PMS1 | DNA mismatch repair protein PMS1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Cre04.g227000 | PMS1 | DNA damage response.DNA repair mechanisms.mismatch... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g15907 | PMS1 | component *(PMS1) of MLH1-PMS1 heterodimer & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01027985001 | PMS1 | DNA damage response.DNA repair mechanisms.mismatch... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os02g37920.1 | PMS1, LOC_Os02g37920 | component PMS1 of MLH1-PMS1 heterodimer | 0.03 | OrthoFinder output from all 47 species | |
Sam_g14037 | No alias | component *(PMS1) of MLH1-PMS1 heterodimer & original... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e022851_P002 | PMS1, Zm00001e022851 | component PMS1 of MLH1-PMS1 heterodimer | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006298 | mismatch repair | IEA | Interproscan |
MF | GO:0030983 | mismatched DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
No external refs found! |